Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903613.1_cds_XP_016453703.1_47803
CDS Infomation

[gene=LOC107778036] [db_xref=GeneID:107778036] [protein=squamosa promoter-binding-like protein 6] [protein_id=XP_016453703.1] [location=complement(join(21594..22276,22719..22822,23559..24343))] [gbkey=CDS]
Sequence

ATGGAACCTTTGAGCTATGCTTTAGAAGGGAGAGGTTTTCTGTTTCCTGATAATGTTGAA
CTGCCTGTTGACACACTTTCAAGAAGTAGAAATATTGTAAAGGAATGGAATTTGAACCCT
TTTTGTGATGTTGATAAAAGCATTTGTGGTCCTAGCCAAGAAATAACTGAAAGCACGGGG
TTGTTGGAATCCGGCATTGCTGATATTTTTAAGAAATCAGCAGCCAGCAACTCGTGCCCG
GGAGCTTTAAGTGGTGAAATAGGTAATGGTTCTATGTTGGAACTTGGAGCCATGTTTAAT
CATAGTGCTACTAAATCTAATAATCTGATGTCATTACCAATTGGTTTGAAATTGGATGAG
TTGACTGATTATGGAGAAGTGAGGACTAGTCAATCGTCAAAAGAAAGTTCAGTTCTTTCT
TCTCCAGAATCTTCATTGCCAACTGGAAAAGCCACCCAGAGAAAGAGTTTGCATTCTCAG
TTTCCTATATCTCAGGTTCGTGGTCAGAAGGGGGAGGAGTCGACTGTTTATAGGGAAGTC
AAGAGTAATCAATCTTTAAAGAGAAACTTGGATTTGTCTTCAGTCAATTCATCATTGCAG
GGAAAAAGACTTCGGACTACAAATTTGCATTCTGAGGTTCCTTTCTGTCAGGTTCACGGT
TGTAACAAGGACCTGAGCTCGTCAAAAGACTATCACAAAAGACACAAAGTATGTGATGAA
CACTCAAAAACTGCTGTAGTTATCGTTAATGGCATTGAGCAAAGGTTCTGTCAGCAGTGT
AGCAGGTTTCACTTGCTGGCAGAATTTGATGAAGGTAAACGCAGCTGTCGCAAACGCCTT
GCAGGGCATAATGAGCGGCGGAGAAAGCCTCAGTTTGATACTCACTGGGGTTCGAGATTC
TTGGATATGACACAAAGGAGAGTTCCATTTCTTTTCCCAGAAATACTTCCTGGTAGTTTC
TTTTATCAAGAAAATTATGAAGTGAATAACAATAACCAGAACCTTAAATTAGAACGTAAG
CCGTTCTGCATATCTCAATTGGCTATGTCAGTCACAAGGGGGCAATCCCCTGCAGAAAGC
ATCCAACATCAGTACGGAGTGAGAAAACAAGATCTATCCAAAGTTCCGGTTGGGTCAACA
TTATTATCTGTTCAAGAATTTTCTGCAGGGCAAAACTCCTCTTGTGCTCTCTCTCTTCTG
TCAGCCCACTCACAAAACCTTCTACACAATTCAACCGACATTTCACCAACTCCCCCATGG
ATGGTTAAAGGAAACGATCATGCCTACATTAAAGACGATCATCATAATCTTGCAAAATCT
CCGAGAGTAAGTGTTGCAAAGAGCTCGACACCAATTGAGCAAGATGGGGTAGTTCATGTT
CCTGAAATTCAGAGAGACGGACATGATCAAAGAGCAAACTCTATGAATTCCAAGAATTGC
CTTTCTCCAGAAGGCGGGCCTACCATGAATTTAGTGCAGTTGTCTTCGCACCTGCTAAGG
GTGGAACAGGAGAAAAATTCTGTTCAAGTGAAGCAGGAAAATGATATCTTTAGTTCTTTT
GCTTCCACTTGA

Peptide Sequence

PEP ID

XP_016453703.1
PEP Infomation

PREDICTED: squamosa promoter-binding-like protein 6 [Nicotiana tabacum]
Sequence

MEPLSYALEGRGFLFPDNVELPVDTLSRSRNIVKEWNLNPFCDVDKSICGPSQEITESTG
LLESGIADIFKKSAASNSCPGALSGEIGNGSMLELGAMFNHSATKSNNLMSLPIGLKLDE
LTDYGEVRTSQSSKESSVLSSPESSLPTGKATQRKSLHSQFPISQVRGQKGEESTVYREV
KSNQSLKRNLDLSSVNSSLQGKRLRTTNLHSEVPFCQVHGCNKDLSSSKDYHKRHKVCDE
HSKTAVVIVNGIEQRFCQQCSRFHLLAEFDEGKRSCRKRLAGHNERRRKPQFDTHWGSRF
LDMTQRRVPFLFPEILPGSFFYQENYEVNNNNQNLKLERKPFCISQLAMSVTRGQSPAES
IQHQYGVRKQDLSKVPVGSTLLSVQEFSAGQNSSCALSLLSAHSQNLLHNSTDISPTPPW
MVKGNDHAYIKDDHHNLAKSPRVSVAKSSTPIEQDGVVHVPEIQRDGHDQRANSMNSKNC
LSPEGGPTMNLVQLSSHLLRVEQEKNSVQVKQENDIFSSFAST

Transcript Sequence

Gene sequence data has not been registered.